Loop J8_4L71

3D structure

PDB id: 4L71 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the Ribosome
Experimental method: X-RAY DIFFRACTION
Resolution: 3.9 Å

Loop

Sequence: AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CCAC*GGUAAG*CGAGGU
Length: 47 nucleotides
Bulged bases: 4L71|1|RA|C|2021, 4L71|1|RA|A|2790
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4L71|1|RA|A|8
4L71|1|RA|U|9
4L71|1|RA|G|10
4L71|1|RA|G|11
4L71|1|RA|U|12
4L71|1|RA|A|13
4L71|1|RA|A|14
4L71|1|RA|G|15
*
4L71|1|RA|U|525
4L71|1|RA|A|526
4L71|1|RA|C|527
4L71|1|RA|A|528
4L71|1|RA|A|529
4L71|1|RA|G|530
4L71|1|RA|C|531
*
4L71|1|RA|G|2018
4L71|1|RA|A|2019
4L71|1|RA|A|2020
4L71|1|RA|C|2021
4L71|1|RA|U|2022
4L71|1|RA|G|2023
*
4L71|1|RA|C|2040
4L71|1|RA|U|2041
4L71|1|RA|A|2042
4L71|1|RA|C|2043
*
4L71|1|RA|G|2625
4L71|1|RA|C|2626
4L71|1|RA|G|2627
4L71|1|RA|C|2628
4L71|1|RA|A|2629
4L71|1|RA|G|2630
*
4L71|1|RA|C|2788
4L71|1|RA|C|2789
4L71|1|RA|A|2790
4L71|1|RA|C|2791
*
4L71|1|RA|G|2805
4L71|1|RA|G|2807
4L71|1|RA|U|2808
4L71|1|RA|A|2809
4L71|1|RA|A|2810
4L71|1|RA|G|2811
*
4L71|1|RA|C|2889
4L71|1|RA|G|2891
4L71|1|RA|A|2892
4L71|1|RA|G|2893
4L71|1|RA|G|2894
4L71|1|RA|U|2895

Current chains

Chain RA: 23S Ribosomal RNA

Nearby chains

Chain R5: 50S ribosomal protein L32
Chain RE: 50S ribosomal protein L3
Chain RN: 50S ribosomal protein L13
Chain RU: 50S ribosomal protein L20
Chain RW: 50S ribosomal protein L22

J8_4L71_001