Loop J8_4WQR

3D structure

PDB id: 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
Description: Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
Experimental method: X-RAY DIFFRACTION
Resolution: 3.15 Å

Loop

Sequence: GAUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CCAC*GGUAAG*CGAGGUC
Length: 49 nucleotides
Bulged bases: 4WQR|1|1H|G|530, 4WQR|1|1H|C|2021
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4WQR|1|1H|G|7
4WQR|1|1H|A|8
4WQR|1|1H|U|9
4WQR|1|1H|G|10
4WQR|1|1H|G|11
4WQR|1|1H|U|12
4WQR|1|1H|A|13
4WQR|1|1H|A|14
4WQR|1|1H|G|15
*
4WQR|1|1H|U|525
4WQR|1|1H|A|526
4WQR|1|1H|C|527
4WQR|1|1H|A|528
4WQR|1|1H|A|529
4WQR|1|1H|G|530
4WQR|1|1H|C|531
*
4WQR|1|1H|G|2018
4WQR|1|1H|A|2019
4WQR|1|1H|A|2020
4WQR|1|1H|C|2021
4WQR|1|1H|U|2022
4WQR|1|1H|G|2023
*
4WQR|1|1H|C|2040
4WQR|1|1H|U|2041
4WQR|1|1H|A|2042
4WQR|1|1H|C|2043
*
4WQR|1|1H|G|2625
4WQR|1|1H|C|2626
4WQR|1|1H|G|2627
4WQR|1|1H|C|2628
4WQR|1|1H|A|2629
4WQR|1|1H|G|2630
*
4WQR|1|1H|C|2788
4WQR|1|1H|C|2789
4WQR|1|1H|A|2790
4WQR|1|1H|C|2791
*
4WQR|1|1H|G|2805
4WQR|1|1H|G|2807
4WQR|1|1H|U|2808
4WQR|1|1H|A|2809
4WQR|1|1H|A|2810
4WQR|1|1H|G|2811
*
4WQR|1|1H|C|2889
4WQR|1|1H|G|2891
4WQR|1|1H|A|2892
4WQR|1|1H|G|2893
4WQR|1|1H|G|2894
4WQR|1|1H|U|2895
4WQR|1|1H|C|2896

Current chains

Chain 1H: 23S ribosomal RNA

Nearby chains

Chain 21: 50S ribosomal protein L3
Chain 58: 50S ribosomal protein L13
Chain C8: 50S ribosomal protein L20
Chain E8: 50S ribosomal protein L22
Chain N8: 50S ribosomal protein L32

J8_4WQR_001