Loop J8_6BZ6

3D structure

PDB id: 6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method: X-RAY DIFFRACTION
Resolution: 3.18 Å

Loop

Sequence: AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CCACGG*CCGGUAAG*CGAGGU
Length: 51 nucleotides
Bulged bases: 6BZ6|1|RA|C|2021, 6BZ6|1|RA|A|2790
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6BZ6|1|RA|A|8
6BZ6|1|RA|U|9
6BZ6|1|RA|G|10
6BZ6|1|RA|G|11
6BZ6|1|RA|U|12
6BZ6|1|RA|A|13
6BZ6|1|RA|A|14
6BZ6|1|RA|G|15
*
6BZ6|1|RA|U|525
6BZ6|1|RA|A|526
6BZ6|1|RA|C|527
6BZ6|1|RA|A|528
6BZ6|1|RA|A|529
6BZ6|1|RA|G|530
6BZ6|1|RA|C|531
*
6BZ6|1|RA|G|2018
6BZ6|1|RA|A|2019
6BZ6|1|RA|A|2020
6BZ6|1|RA|C|2021
6BZ6|1|RA|U|2022
6BZ6|1|RA|G|2023
*
6BZ6|1|RA|C|2040
6BZ6|1|RA|U|2041
6BZ6|1|RA|A|2042
6BZ6|1|RA|C|2043
*
6BZ6|1|RA|G|2625
6BZ6|1|RA|C|2626
6BZ6|1|RA|G|2627
6BZ6|1|RA|C|2628
6BZ6|1|RA|A|2629
6BZ6|1|RA|G|2630
*
6BZ6|1|RA|C|2788
6BZ6|1|RA|C|2789
6BZ6|1|RA|A|2790
6BZ6|1|RA|C|2791
6BZ6|1|RA|G|2792
6BZ6|1|RA|G|2793
*
6BZ6|1|RA|C|2803
6BZ6|1|RA|C|2804
6BZ6|1|RA|G|2805
6BZ6|1|RA|G|2807
6BZ6|1|RA|U|2808
6BZ6|1|RA|A|2809
6BZ6|1|RA|A|2810
6BZ6|1|RA|G|2811
*
6BZ6|1|RA|C|2889
6BZ6|1|RA|G|2891
6BZ6|1|RA|A|2892
6BZ6|1|RA|G|2893
6BZ6|1|RA|G|2894
6BZ6|1|RA|U|2895

Current chains

Chain RA: 23S rRNA

Nearby chains

Chain R5: 50S ribosomal protein L32
Chain RE: 50S ribosomal protein L3
Chain RN: 50S ribosomal protein L13
Chain RU: 50S ribosomal protein L20
Chain RW: 50S ribosomal protein L22

J8_6BZ6_002