J8_6I7V_001

3D structure

PDB id

6I7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal protein paralogs bL31 and bL36

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGC*GCGAACCGGGG*CCCCGAGGAAAAGAAAUC*GAGAUUC*GAGCAGCCCAGAG*CUCGAUGAGUAGG*CUGAAUAUG*CAAGGCUAAAUAC

Length

87 nucleotides

Bulged bases

6I7V|1|CA|U|405

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6I7V|1|CA|G|45
6I7V|1|CA|G|46
6I7V|1|CA|C|47
*
6I7V|1|CA|G|178
6I7V|1|CA|C|179
6I7V|1|CA|G|180
6I7V|1|CA|A|181
6I7V|1|CA|A|182
6I7V|1|CA|C|183
6I7V|1|CA|C|184
6I7V|1|CA|G|185
6I7V|1|CA|G|186
6I7V|1|CA|G|187
6I7V|1|CA|G|188
*
6I7V|1|CA|C|208
6I7V|1|CA|C|209
6I7V|1|CA|C|210
6I7V|1|CA|C|211
6I7V|1|CA|G|212
6I7V|1|CA|A|213
6I7V|1|CA|G|214
6I7V|1|CA|G|215
6I7V|1|CA|A|216
6I7V|1|CA|A|217
6I7V|1|CA|A|218
6I7V|1|CA|A|219
6I7V|1|CA|G|220
6I7V|1|CA|A|221
6I7V|1|CA|A|222
6I7V|1|CA|A|223
6I7V|1|CA|U|224
6I7V|1|CA|C|225
*
6I7V|1|CA|G|230
6I7V|1|CA|A|231
6I7V|1|CA|G|232
6I7V|1|CA|A|233
6I7V|1|CA|U|234
6I7V|1|CA|U|235
6I7V|1|CA|C|236
*
6I7V|1|CA|G|261
6I7V|1|CA|A|262
6I7V|1|CA|G|263
6I7V|1|CA|C|264
6I7V|1|CA|A|265
6I7V|1|CA|G|266
6I7V|1|CA|C|267
6I7V|1|CA|C|268
6I7V|1|CA|C|269
6I7V|1|CA|A|270
6I7V|1|CA|G|271
6I7V|1|CA|A|272
6I7V|1|CA|G|273
*
6I7V|1|CA|C|364
6I7V|1|CA|U|365
6I7V|1|CA|C|366
6I7V|1|CA|G|367
6I7V|1|CA|A|368
6I7V|1|CA|U|369
6I7V|1|CA|G|370
6I7V|1|CA|A|371
6I7V|1|CA|G|372
6I7V|1|CA|U|373
6I7V|1|CA|A|374
6I7V|1|CA|G|375
6I7V|1|CA|G|376
*
6I7V|1|CA|C|398
6I7V|1|CA|U|399
6I7V|1|CA|G|400
6I7V|1|CA|A|401
6I7V|1|CA|A|402
6I7V|1|CA|U|403
6I7V|1|CA|A|404
6I7V|1|CA|U|405
6I7V|1|CA|G|406
*
6I7V|1|CA|C|421
6I7V|1|CA|A|422
6I7V|1|CA|A|423
6I7V|1|CA|G|424
6I7V|1|CA|G|425
6I7V|1|CA|C|426
6I7V|1|CA|U|427
6I7V|1|CA|A|428
6I7V|1|CA|A|429
6I7V|1|CA|A|430
6I7V|1|CA|U|431
6I7V|1|CA|A|432
6I7V|1|CA|C|433

Current chains

Chain CA

23S ribsomal RNA

Nearby chains

Chain C3

50S ribosomal protein L34

Chain CH

50S ribosomal protein L9

Chain CY

50S ribosomal protein L28