Loop J8_6UCQ

3D structure

PDB id: 6UCQ (explore in PDB, NAKB, or RNA 3D Hub)
Description: Crystal structure of the Thermus thermophilus 70S ribosome recycling complex
Experimental method: X-RAY DIFFRACTION
Resolution: 3.5 Å

Loop

Sequence: AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CCAC*GGUAAG*CGAGGU
Length: 47 nucleotides
Bulged bases: 6UCQ|1|1A|G|530, 6UCQ|1|1A|C|2021, 6UCQ|1|1A|A|2790
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6UCQ|1|1A|A|8
6UCQ|1|1A|U|9
6UCQ|1|1A|G|10
6UCQ|1|1A|G|11
6UCQ|1|1A|U|12
6UCQ|1|1A|A|13
6UCQ|1|1A|A|14
6UCQ|1|1A|G|15
*
6UCQ|1|1A|U|525
6UCQ|1|1A|A|526
6UCQ|1|1A|C|527
6UCQ|1|1A|A|528
6UCQ|1|1A|A|529
6UCQ|1|1A|G|530
6UCQ|1|1A|C|531
*
6UCQ|1|1A|G|2018
6UCQ|1|1A|A|2019
6UCQ|1|1A|A|2020
6UCQ|1|1A|C|2021
6UCQ|1|1A|U|2022
6UCQ|1|1A|G|2023
*
6UCQ|1|1A|C|2040
6UCQ|1|1A|U|2041
6UCQ|1|1A|A|2042
6UCQ|1|1A|C|2043
*
6UCQ|1|1A|G|2625
6UCQ|1|1A|C|2626
6UCQ|1|1A|G|2627
6UCQ|1|1A|C|2628
6UCQ|1|1A|A|2629
6UCQ|1|1A|G|2630
*
6UCQ|1|1A|C|2788
6UCQ|1|1A|C|2789
6UCQ|1|1A|A|2790
6UCQ|1|1A|C|2791
*
6UCQ|1|1A|G|2805
6UCQ|1|1A|G|2807
6UCQ|1|1A|U|2808
6UCQ|1|1A|A|2809
6UCQ|1|1A|A|2810
6UCQ|1|1A|G|2811
*
6UCQ|1|1A|C|2889
6UCQ|1|1A|G|2891
6UCQ|1|1A|A|2892
6UCQ|1|1A|G|2893
6UCQ|1|1A|G|2894
6UCQ|1|1A|U|2895

Current chains

Chain 1A: 23S Ribosomal RNA

Nearby chains

Chain 15: 50S ribosomal protein L32
Chain 1E: 50S ribosomal protein L3
Chain 1N: 50S ribosomal protein L13
Chain 1U: 50S ribosomal protein L20
Chain 1W: 50S ribosomal protein L22

J8_6UCQ_001