Loop J8_6WQN

3D structure

PDB id: 6WQN (explore in PDB, NAKB, or RNA 3D Hub)
Description: Structure of the 50S subunit of the ribosome from Methicillin Resistant Staphylococcus aureus in complex with the antibiotic, contezolid
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

Loop

Sequence: UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CCAAC*GUUAUAAG*CGAAGA
Length: 50 nucleotides
Bulged bases: 6WQN|1|1|U|12, 6WQN|1|1|G|575, 6WQN|1|1|G|2048
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6WQN|1|1|U|8
6WQN|1|1|U|9
6WQN|1|1|A|10
6WQN|1|1|U|11
6WQN|1|1|U|12
6WQN|1|1|A|13
6WQN|1|1|A|14
6WQN|1|1|G|15
*
6WQN|1|1|U|570
6WQN|1|1|A|571
6WQN|1|1|C|572
6WQN|1|1|A|573
6WQN|1|1|A|574
6WQN|1|1|G|575
6WQN|1|1|U|576
*
6WQN|1|1|A|2045
6WQN|1|1|U|2046
6WQN|1|1|A|2047
6WQN|1|1|G|2048
6WQN|1|1|U|2049
6WQN|1|1|A|2050
*
6WQN|1|1|U|2067
6WQN|1|1|U|2068
6WQN|1|1|A|2069
6WQN|1|1|C|2070
*
6WQN|1|1|G|2652
6WQN|1|1|C|2653
6WQN|1|1|G|2654
6WQN|1|1|U|2655
6WQN|1|1|A|2656
6WQN|1|1|G|2657
*
6WQN|1|1|C|2815
6WQN|1|1|C|2816
6WQN|1|1|A|2817
6WQN|1|1|A|2818
6WQN|1|1|C|2819
*
6WQN|1|1|G|2824
6WQN|1|1|U|2825
6WQN|1|1|U|2826
6WQN|1|1|A|2827
6WQN|1|1|U|2828
6WQN|1|1|A|2829
6WQN|1|1|A|2830
6WQN|1|1|G|2831
*
6WQN|1|1|C|2909
6WQN|1|1|G|2910
6WQN|1|1|A|2911
6WQN|1|1|A|2912
6WQN|1|1|G|2913
6WQN|1|1|A|2914

Current chains

Chain 1: 23S rRNA

Nearby chains

Chain C: 50S ribosomal protein L20
Chain E: 50S ribosomal protein L22
Chain L: 50S ribosomal protein L3
Chain N: 50S ribosomal protein L32
Chain V: 50S ribosomal protein L13

J8_6WQN_001