3D structure

PDB id
7AC7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of accomodated trans-translation complex on E. Coli stalled ribosome.
Experimental method
ELECTRON MICROSCOPY
Resolution
3.08 Å

Loop

Sequence
CGACUAAG*UACAAGC*GAACUC*GUAC*GCGCUG*CCUG*CC*GAGG
Length
41 nucleotides
Bulged bases
7AC7|1|1|C|2021
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7AC7|1|1|C|8
7AC7|1|1|G|9
7AC7|1|1|A|10
7AC7|1|1|C|11
7AC7|1|1|U|12
7AC7|1|1|A|13
7AC7|1|1|A|14
7AC7|1|1|G|15
*
7AC7|1|1|U|525
7AC7|1|1|A|526
7AC7|1|1|C|527
7AC7|1|1|A|528
7AC7|1|1|A|529
7AC7|1|1|G|530
7AC7|1|1|C|531
*
7AC7|1|1|G|2018
7AC7|1|1|A|2019
7AC7|1|1|A|2020
7AC7|1|1|C|2021
7AC7|1|1|U|2022
7AC7|1|1|C|2023
*
7AC7|1|1|G|2040
7AC7|1|1|U|2041
7AC7|1|1|A|2042
7AC7|1|1|C|2043
*
7AC7|1|1|G|2625
7AC7|1|1|C|2626
7AC7|1|1|G|2627
7AC7|1|1|C|2628
7AC7|1|1|U|2629
7AC7|1|1|G|2630
*
7AC7|1|1|C|2788
7AC7|1|1|C|2789
7AC7|1|1|U|2790
7AC7|1|1|G|2791
*
7AC7|1|1|C|2805
7AC7|1|1|C|2806
*
7AC7|1|1|G|2892
7AC7|1|1|A|2893
7AC7|1|1|G|2894
7AC7|1|1|G|2895

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L3
Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20
Chain S
50S ribosomal protein L22
Chain b
50S ribosomal protein L32

Coloring options:

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