Loop J8_7AS8

3D structure

PDB id: 7AS8 (explore in PDB, NAKB, or RNA 3D Hub)
Description: Bacillus subtilis ribosome quality control complex state B. Ribosomal 50S subunit with P-tRNA, RqcH, and RqcP/YabO
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

Loop

Sequence: UUAGAAAG*UACAAGU*AUAGUA*UUAC*GCGCAG*CCAU*AGUAAG*CGAGGA
Length: 47 nucleotides
Bulged bases: 7AS8|1|A|G|576, 7AS8|1|A|G|2050
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7AS8|1|A|U|8
7AS8|1|A|U|9
7AS8|1|A|A|10
7AS8|1|A|G|11
7AS8|1|A|A|12
7AS8|1|A|A|13
7AS8|1|A|A|14
7AS8|1|A|G|15
*
7AS8|1|A|U|571
7AS8|1|A|A|572
7AS8|1|A|C|573
7AS8|1|A|A|574
7AS8|1|A|A|575
7AS8|1|A|G|576
7AS8|1|A|U|577
*
7AS8|1|A|A|2047
7AS8|1|A|U|2048
7AS8|1|A|A|2049
7AS8|1|A|G|2050
7AS8|1|A|U|2051
7AS8|1|A|A|2052
*
7AS8|1|A|U|2069
7AS8|1|A|U|2070
7AS8|1|A|A|2071
7AS8|1|A|C|2072
*
7AS8|1|A|G|2654
7AS8|1|A|C|2655
7AS8|1|A|G|2656
7AS8|1|A|C|2657
7AS8|1|A|A|2658
7AS8|1|A|G|2659
*
7AS8|1|A|C|2817
7AS8|1|A|C|2818
7AS8|1|A|A|2819
7AS8|1|A|U|2820
*
7AS8|1|A|A|2831
7AS8|1|A|G|2832
7AS8|1|A|U|2833
7AS8|1|A|A|2834
7AS8|1|A|A|2835
7AS8|1|A|G|2836
*
7AS8|1|A|C|2914
7AS8|1|A|G|2915
7AS8|1|A|A|2916
7AS8|1|A|G|2917
7AS8|1|A|G|2918
7AS8|1|A|A|2919

Current chains

Chain A: 23S rRNA

Nearby chains

Chain F: 50S ribosomal protein L3
Chain N: 50S ribosomal protein L13
Chain U: 50S ribosomal protein L20
Chain W: 50S ribosomal protein L22
Chain f: 50S ribosomal protein L32

J8_7AS8_001