J8_7AZS_001

3D structure

PDB id

7AZS (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

AUGGUAAG*UACAAGC*GAACUG*CUAC*GCGCAG*CCAC*GGUAAG*CGAGGU

Length

47 nucleotides

Bulged bases

7AZS|1|23SA|G|557, 7AZS|1|23SA|C|2046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7AZS|1|23SA|A|8
7AZS|1|23SA|U|9
7AZS|1|23SA|G|10
7AZS|1|23SA|G|11
7AZS|1|23SA|U|12
7AZS|1|23SA|A|13
7AZS|1|23SA|A|14
7AZS|1|23SA|G|15
*
7AZS|1|23SA|U|552
7AZS|1|23SA|A|553
7AZS|1|23SA|C|554
7AZS|1|23SA|A|555
7AZS|1|23SA|A|556
7AZS|1|23SA|G|557
7AZS|1|23SA|C|558
*
7AZS|1|23SA|G|2043
7AZS|1|23SA|A|2044
7AZS|1|23SA|A|2045
7AZS|1|23SA|C|2046
7AZS|1|23SA|U|2047
7AZS|1|23SA|G|2048
*
7AZS|1|23SA|C|2065
7AZS|1|23SA|U|2066
7AZS|1|23SA|A|2067
7AZS|1|23SA|C|2068
*
7AZS|1|23SA|G|2640
7AZS|1|23SA|C|2641
7AZS|1|23SA|G|2642
7AZS|1|23SA|C|2643
7AZS|1|23SA|A|2644
7AZS|1|23SA|G|2645
*
7AZS|1|23SA|C|2804
7AZS|1|23SA|C|2805
7AZS|1|23SA|A|2806
7AZS|1|23SA|C|2807
*
7AZS|1|23SA|G|2819
7AZS|1|23SA|G|2820
7AZS|1|23SA|U|2821
7AZS|1|23SA|A|2822
7AZS|1|23SA|A|2823
7AZS|1|23SA|G|2824
*
7AZS|1|23SA|C|2902
7AZS|1|23SA|G|2903
7AZS|1|23SA|A|2904
7AZS|1|23SA|G|2905
7AZS|1|23SA|G|2906
7AZS|1|23SA|U|2907

Current chains

Chain 23SA

23S rRNA

Nearby chains

Chain L13A

50S ribosomal protein L13

Chain L20A

50S ribosomal protein L20

Chain L22A

50S ribosomal protein L22

Chain L32A

50S ribosomal protein L32

Chain L3A

50S ribosomal protein L3