Loop J8_7NHN

3D structure

PDB id: 7NHN (explore in PDB, NAKB, or RNA 3D Hub)
Description: VgaL, an antibiotic resistance ABCF, in complex with 70S ribosome from Listeria monocytogenes
Experimental method: ELECTRON MICROSCOPY
Resolution: 2.9 Å

Loop

Sequence: UUAGAAAG*UACAAGU*AUAGUA*UUAC*GCGCAG*CCAU*AGUAAG*CGAGGA
Length: 47 nucleotides
Bulged bases: 7NHN|1|A|G|2054
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7NHN|1|A|U|8
7NHN|1|A|U|9
7NHN|1|A|A|10
7NHN|1|A|G|11
7NHN|1|A|A|12
7NHN|1|A|A|13
7NHN|1|A|A|14
7NHN|1|A|G|15
*
7NHN|1|A|U|570
7NHN|1|A|A|571
7NHN|1|A|C|572
7NHN|1|A|A|573
7NHN|1|A|A|574
7NHN|1|A|G|575
7NHN|1|A|U|576
*
7NHN|1|A|A|2051
7NHN|1|A|U|2052
7NHN|1|A|A|2053
7NHN|1|A|G|2054
7NHN|1|A|U|2055
7NHN|1|A|A|2056
*
7NHN|1|A|U|2073
7NHN|1|A|U|2074
7NHN|1|A|A|2075
7NHN|1|A|C|2076
*
7NHN|1|A|G|2658
7NHN|1|A|C|2659
7NHN|1|A|G|2660
7NHN|1|A|C|2661
7NHN|1|A|A|2662
7NHN|1|A|G|2663
*
7NHN|1|A|C|2821
7NHN|1|A|C|2822
7NHN|1|A|A|2823
7NHN|1|A|U|2824
*
7NHN|1|A|A|2835
7NHN|1|A|G|2836
7NHN|1|A|U|2837
7NHN|1|A|A|2838
7NHN|1|A|A|2839
7NHN|1|A|G|2840
*
7NHN|1|A|C|2918
7NHN|1|A|G|2919
7NHN|1|A|A|2920
7NHN|1|A|G|2921
7NHN|1|A|G|2922
7NHN|1|A|A|2923

Current chains

Chain A: 23S rRNA

Nearby chains

Chain 5: 50S ribosomal protein L32-2
Chain H: 50S ribosomal protein L3
Chain M: 50S ribosomal protein L13
Chain T: 50S ribosomal protein L20
Chain V: 50S ribosomal protein L22

J8_7NHN_001