Loop J8_7TTU

3D structure

PDB id: 7TTU (explore in PDB, NAKB, or RNA 3D Hub)
Description: 50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3 Å

Loop

Sequence: UUAUUAAG*UACAAGU*AUAGUA*UUAC*GCGUAG*CCA*UAUAAGAU*AUCGAAGA
Length: 50 nucleotides
Bulged bases: 7TTU|1|1|U|12, 7TTU|1|1|G|575, 7TTU|1|1|G|2048
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

7TTU|1|1|U|8
7TTU|1|1|U|9
7TTU|1|1|A|10
7TTU|1|1|U|11
7TTU|1|1|U|12
7TTU|1|1|A|13
7TTU|1|1|A|14
7TTU|1|1|G|15
*
7TTU|1|1|U|570
7TTU|1|1|A|571
7TTU|1|1|C|572
7TTU|1|1|A|573
7TTU|1|1|A|574
7TTU|1|1|G|575
7TTU|1|1|U|576
*
7TTU|1|1|A|2045
7TTU|1|1|U|2046
7TTU|1|1|A|2047
7TTU|1|1|G|2048
7TTU|1|1|U|2049
7TTU|1|1|A|2050
*
7TTU|1|1|U|2067
7TTU|1|1|U|2068
7TTU|1|1|A|2069
7TTU|1|1|C|2070
*
7TTU|1|1|G|2652
7TTU|1|1|C|2653
7TTU|1|1|G|2654
7TTU|1|1|U|2655
7TTU|1|1|A|2656
7TTU|1|1|G|2657
*
7TTU|1|1|C|2815
7TTU|1|1|C|2816
7TTU|1|1|A|2817
*
7TTU|1|1|U|2826
7TTU|1|1|A|2827
7TTU|1|1|U|2828
7TTU|1|1|A|2829
7TTU|1|1|A|2830
7TTU|1|1|G|2831
7TTU|1|1|A|2832
7TTU|1|1|U|2833
*
7TTU|1|1|A|2907
7TTU|1|1|U|2908
7TTU|1|1|C|2909
7TTU|1|1|G|2910
7TTU|1|1|A|2911
7TTU|1|1|A|2912
7TTU|1|1|G|2913
7TTU|1|1|A|2914

Current chains

Chain 1: 23S rRNA

Nearby chains

Chain C: 50S ribosomal protein L20
Chain E: 50S ribosomal protein L22
Chain L: 50S ribosomal protein L3
Chain N: 50S ribosomal protein L32
Chain V: 50S ribosomal protein L13

J8_7TTU_001