J8_9K0Z_001

3D structure

PDB id

9K0Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

EF-G2 bound 70S ribosome complex of M. smegmatis

Experimental method

ELECTRON MICROSCOPY

Resolution

4.7 Å

Loop

Sequence

UGUUUAAG*UACAAUC*GCACUA*UUAC*GCGUCA*UCAC*GAUAAG*CGAAAA

Length

47 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9K0Z|1|h|U|5
9K0Z|1|h|G|6
9K0Z|1|h|U|7
9K0Z|1|h|U|8
9K0Z|1|h|U|9
9K0Z|1|h|A|10
9K0Z|1|h|A|11
9K0Z|1|h|G|12
*
9K0Z|1|h|U|612
9K0Z|1|h|A|613
9K0Z|1|h|C|614
9K0Z|1|h|A|615
9K0Z|1|h|A|616
9K0Z|1|h|U|617
9K0Z|1|h|C|618
*
9K0Z|1|h|G|2242
9K0Z|1|h|C|2243
9K0Z|1|h|A|2244
9K0Z|1|h|C|2245
9K0Z|1|h|U|2246
9K0Z|1|h|A|2247
*
9K0Z|1|h|U|2264
9K0Z|1|h|U|2265
9K0Z|1|h|A|2266
9K0Z|1|h|C|2267
*
9K0Z|1|h|G|2849
9K0Z|1|h|C|2850
9K0Z|1|h|G|2851
9K0Z|1|h|U|2852
9K0Z|1|h|C|2853
9K0Z|1|h|A|2854
*
9K0Z|1|h|U|3012
9K0Z|1|h|C|3013
9K0Z|1|h|A|3014
9K0Z|1|h|C|3015
*
9K0Z|1|h|G|3027
9K0Z|1|h|A|3028
9K0Z|1|h|U|3029
9K0Z|1|h|A|3030
9K0Z|1|h|A|3031
9K0Z|1|h|G|3032
*
9K0Z|1|h|C|3110
9K0Z|1|h|G|3111
9K0Z|1|h|A|3112
9K0Z|1|h|A|3113
9K0Z|1|h|A|3114
9K0Z|1|h|A|3115

Current chains

Chain h

23S ribosomal RNA

Nearby chains

Chain b

Large ribosomal subunit protein bL32

Chain j

Large ribosomal subunit protein uL3

Chain q

Large ribosomal subunit protein uL13

Chain x

Large ribosomal subunit protein bL20

Chain z

Large ribosomal subunit protein uL22