Loop J8_9K10

3D structure

PDB id: 9K10 (explore in PDB, NAKB, or RNA 3D Hub)
Description: EF-G2 bound 50S ribosome subunit complex of M. smegmatis
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.6 Å

Loop

Sequence: UGUUUAAG*UACAAUC*GCACUA*UUAC*GCGUCA*UCAC*GAUAAG*CGAAAA
Length: 47 nucleotides
Bulged bases: None detected
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

9K10|1|A|U|5
9K10|1|A|G|6
9K10|1|A|U|7
9K10|1|A|U|8
9K10|1|A|U|9
9K10|1|A|A|10
9K10|1|A|A|11
9K10|1|A|G|12
*
9K10|1|A|U|612
9K10|1|A|A|613
9K10|1|A|C|614
9K10|1|A|A|615
9K10|1|A|A|616
9K10|1|A|U|617
9K10|1|A|C|618
*
9K10|1|A|G|2242
9K10|1|A|C|2243
9K10|1|A|A|2244
9K10|1|A|C|2245
9K10|1|A|U|2246
9K10|1|A|A|2247
*
9K10|1|A|U|2264
9K10|1|A|U|2265
9K10|1|A|A|2266
9K10|1|A|C|2267
*
9K10|1|A|G|2849
9K10|1|A|C|2850
9K10|1|A|G|2851
9K10|1|A|U|2852
9K10|1|A|C|2853
9K10|1|A|A|2854
*
9K10|1|A|U|3012
9K10|1|A|C|3013
9K10|1|A|A|3014
9K10|1|A|C|3015
*
9K10|1|A|G|3027
9K10|1|A|A|3028
9K10|1|A|U|3029
9K10|1|A|A|3030
9K10|1|A|A|3031
9K10|1|A|G|3032
*
9K10|1|A|C|3110
9K10|1|A|G|3111
9K10|1|A|A|3112
9K10|1|A|A|3113
9K10|1|A|A|3114
9K10|1|A|A|3115

Current chains

Chain A: 23S ribosomal RNA

Nearby chains

Chain D: 50S ribosomal protein L3
Chain K: 50S ribosomal protein L13
Chain R: 50S ribosomal protein L20
Chain T: 50S ribosomal protein L22
Chain b: 50S ribosomal protein L32

J8_9K10_001