J9_5ADY_002
3D structure
- PDB id
- 5ADY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of the 50S ribosome subunit bound with HflX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- CGACUAAG*UACAAGCAG*CGUACCUUUUGUAUAAUGGG*CA*UGAACUC*GUAC*GCGCUG*CC*GG
- Length
- 60 nucleotides
- Bulged bases
- 5ADY|1|B|A|532, 5ADY|1|B|U|568, 5ADY|1|B|U|571, 5ADY|1|B|A|574, 5ADY|1|B|C|2021
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ADY|1|B|C|8
5ADY|1|B|G|9
5ADY|1|B|A|10
5ADY|1|B|C|11
5ADY|1|B|U|12
5ADY|1|B|A|13
5ADY|1|B|A|14
5ADY|1|B|G|15
*
5ADY|1|B|U|525
5ADY|1|B|A|526
5ADY|1|B|C|527
5ADY|1|B|A|528
5ADY|1|B|A|529
5ADY|1|B|G|530
5ADY|1|B|C|531
5ADY|1|B|A|532
5ADY|1|B|G|533
*
5ADY|1|B|C|560
5ADY|1|B|G|561
5ADY|1|B|U|562
5ADY|1|B|A|563
5ADY|1|B|C|564
5ADY|1|B|C|565
5ADY|1|B|U|566
5ADY|1|B|U|567
5ADY|1|B|U|568
5ADY|1|B|U|569
5ADY|1|B|G|570
5ADY|1|B|U|571
5ADY|1|B|A|572
5ADY|1|B|U|573
5ADY|1|B|A|574
5ADY|1|B|A|575
5ADY|1|B|U|576
5ADY|1|B|G|577
5ADY|1|B|G|578
5ADY|1|B|G|579
*
5ADY|1|B|C|1261
5ADY|1|B|A|1262
*
5ADY|1|B|U|2017
5ADY|1|B|G|2018
5ADY|1|B|A|2019
5ADY|1|B|A|2020
5ADY|1|B|C|2021
5ADY|1|B|U|2022
5ADY|1|B|C|2023
*
5ADY|1|B|G|2040
5ADY|1|B|U|2041
5ADY|1|B|A|2042
5ADY|1|B|C|2043
*
5ADY|1|B|G|2625
5ADY|1|B|C|2626
5ADY|1|B|G|2627
5ADY|1|B|C|2628
5ADY|1|B|U|2629
5ADY|1|B|G|2630
*
5ADY|1|B|C|2788
5ADY|1|B|C|2789
*
5ADY|1|B|G|2894
5ADY|1|B|G|2895
Current chains
- Chain B
- 23S RRNA
Nearby chains
- Chain 0
- 50S RIBOSOMAL PROTEIN L32
- Chain D
- 50S RIBOSOMAL PROTEIN L3
- Chain J
- 50S RIBOSOMAL PROTEIN L13
- Chain L
- 50S RIBOSOMAL PROTEIN L15
- Chain Q
- 50S RIBOSOMAL PROTEIN L20
- Chain R
- 50S RIBOSOMAL PROTEIN L21
- Chain S
- 50S RIBOSOMAL PROTEIN L22
Coloring options: