Motif HL_01389.1 Version HL_01389.1 of this group appears in releases 1.16 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1VW3_024 | 1VW3 | 0.0000 | 2 | A | U | 1254 | U | 1256 | A | 1258 | cWW | |
| 2 | HL_4OOG_001 | 4OOG | 0.6950 | 3 | Mini UNCG | D | G | 14 | U | 17 | C | 19 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUUA | 1 |
| GAGUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUU | 1 |
| AGUC | 1 |
Release history
| Release | 1.16 | 1.17 | 1.18 |
|---|---|---|---|
| Date | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 2 parents | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_01389.1 | Only in the parent motif |
|---|---|---|---|
| HL_10894.1 Compare | HL_4OOG_001 | HL_1VW3_024 | |
| HL_78660.1 Compare | HL_1VW3_024 | HL_4OOG_001 | HL_1VW3_021 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Mini UNCG (1)
- Basepair signature
- cWW
- Heat map statistics
- Min 0.70 | Avg 0.35 | Max 0.70
Coloring options: