Motif HL_01472.3 Version HL_01472.3 of this group appears in releases 3.37 to 3.53
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V9F_005 | 4V9F | 0.4085 | 1 | 0 | C | 136 | U | 137 | C | 139 | G | 140 | C | 141 | G | 142 | cWW | tSW |
| 2 | HL_5J7L_025 | 5J7L | 0.0000 | 1 | AA | G | 1134 | U | 1135 | C | 1137 | G | 1138 | G | 1139 | C | 1140 | ncWW | ntSW |
| 3 | HL_4LFB_026 | 4LFB | 0.2975 | 1 | A | G | 1134 | U | 1135 | C | 1137 | G | 1138 | G | 1139 | C | 1140 | cWW | tSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUCGCG | 1 |
| GUCCGGC | 1 |
| GUUCGGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCGC | 1 |
| UCCGG | 1 |
| UUCGG | 1 |
Release history
| Release | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 |
| Status | Updated, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-R-tSW-R
- Heat map statistics
- Min 0.30 | Avg 0.25 | Max 0.43
Coloring options: