Motif HL_03897.1 Version HL_03897.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J9W_061 | 3J9W | 0.7664 | 1 | BA | LSU rRNA | C | 932 | C | 933 | A | 935 | C | 936 | C | 937 | G | 938 | cWW | |
| 2 | HL_3JAM_009 | 3JAM | 0.0000 | 0 | 2 | SSU rRNA | U | 367 | A | 368 | A | 369 | G | 370 | G | 371 | G | 372 | cWW | |
| 3 | HL_3KTW_001 | 3KTW | 0.8673 | 0 | GNRA | C | SRP RNA | U | 163 | G | 164 | G | 165 | A | 166 | G | 167 | G | 168 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCUACCG | 1 |
| UAAGGG | 1 |
| UGGAGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUACC | 1 |
| AAGG | 1 |
| GGAG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- GNRA (1)
- Basepair signature
- cWW-R-R-R
- Heat map statistics
- Min 0.77 | Avg 0.56 | Max 0.87
Coloring options: