Motif HL_04698.1 Version HL_04698.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3J7Y_005 | 3J7Y | 0.0000 | 0 | A | LSU rRNA | G | 1831 | A | 1832 | C | 1833 | U | 1834 | A | 1835 | A | 1836 | C | 1837 | C | 1838 | C | 1839 | cWW | ncWB |
| 2 | HL_4V19_004 | 4V19 | 0.5906 | 0 | A | LSU rRNA | G | 166 | A | 167 | U | 168 | U | 169 | A | 170 | C | 171 | C | 172 | C | 173 | C | 174 | cWW | ncWB |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GACUAACCC | 1 |
| GAUUACCCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| ACUAACC | 1 |
| AUUACCC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R
- Heat map statistics
- Min 0.59 | Avg 0.30 | Max 0.59
Coloring options: