Motif HL_05941.1 Version HL_05941.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3D2V_001 | 3D2V | 0.0000 | 1 | A | TPP riboswitch (THI element) | G | 17 | U | 19 | C | 20 | A | 21 | C | 22 | cWW | cWH |
| 2 | HL_5FDU_004 | 5FDU | 0.8545 | 1 | 1A | LSU rRNA | G | 136 | G | 138 | A | 139 | A | 140 | C | 141 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUCAC | 1 |
| GGGAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCA | 1 |
| GGAA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWH-R
- Heat map statistics
- Min 0.85 | Avg 0.43 | Max 0.85
Coloring options: