Motif HL_06097.1 Version HL_06097.1 of this group appears in releases 3.7 to 3.15
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3IWN_002 | 3IWN | 0.0000 | 1 | A | C-di-GMP riboswitch | C | 57 | A | 58 | U | 59 | U | 60 | G | 61 | A | 63 | C | 64 | U | 65 | C | 66 | C | 67 | G | 68 | cWW | |
| 2 | HL_6F4G_001 | 6F4G | 0.9492 | 2 | C | U2-SL4 | U | 8 | A | 9 | U | 10 | U | 11 | G | 12 | G | 15 | U | 16 | A | 17 | C | 18 | C | 19 | G | 20 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAUUGCACUCCG | 1 |
| UAUUGCAGUACCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUGCACUCC | 1 |
| AUUGCAGUACC | 1 |
Release history
| Release | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.95 | Avg 0.47 | Max 0.95
Coloring options: