Motif HL_06426.1 Version HL_06426.1 of this group appears in releases 1.2 to 1.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 3-8 | 6-7 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1QRS_001 | 1QRS | 0.0000 | 1 | B | C | 12 | A | 13 | A | 14 | G | 15 | C | 16 | G | 19 | U | 20 | A | 21 | A | 22 | G | 23 | cWW | tSH | cWS | cSH |
| 2 | HL_4JXZ_001 | 4JXZ | 0.6643 | 1 | B | C | 912 | A | 913 | A | 914 | G | 915 | C | 916 | G | 919 | U | 920 | A | 921 | A | 922 | G | 923 | cWW | tSH | cWS |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAGCGGUAAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGCGGUAA | 2 |
Release history
| Release | 1.2 |
|---|---|
| Date | 2013-05-04 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in HL_06426.1 | Only in the parent motif |
|---|---|---|---|
| HL_81661.1 Compare | HL_1QRS_001 | HL_4JXZ_001 |
Children motifs
| Child motif | Common motif instances | Only in HL_06426.1 | Only in the child motif |
|---|---|---|---|
| HL_77692.1 Compare | HL_1QRS_001 | HL_4JXZ_001 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-cWS-R-R-R-R
- Heat map statistics
- Min 0.66 | Avg 0.33 | Max 0.66
Coloring options: