Motif HL_07583.1 Version HL_07583.1 of this group appears in releases 3.98 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 4-9 | 5-8 | 6-8 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4WSM_208 | 4WSM | 0.0000 | 3 | 1K | tRNA | U | 11 | G | 12 | G | 13 | A | 14 | A | 15 | U | 16 | G | 19 | U | 20 | A | 21 | A | 23 | C | 24 | A | 25 | ncWW | ncWW | ncWw | |||
| 2 | HL_9IWF_004 | 9IWF | 0.8287 | 1 | B | Purine riboswitch | A | 15 | U | 16 | U | 17 | A | 18 | A | 19 | U | 20 | A | 21 | G | 23 | G | 24 | U | 25 | U | 26 | U | 27 | cWW | cwW | ncWw | ncsS | ncSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGGAAUUGGUAGACA | 1 |
| AUUAAUACGGUUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGAAUUGGUAGAC | 1 |
| UUAAUACGGUU | 1 |
Release history
| Release | 3.98 |
|---|---|
| Date | 2025-06-18 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.83 | Avg 0.41 | Max 0.83
Coloring options: