Motif HL_07891.1 Version HL_07891.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3CUL_006 | 3CUL | 0.0000 | 1 | D | RNA (92-MER) | G | 169 | U | 170 | U | 171 | C | 172 | G | 173 | A | 174 | U | 176 | C | 177 | cWW | cwW | |
| 2 | HL_5AJ3_004 | 5AJ3 | 0.9596 | 0 | A | SSU rRNA | C | 122 | U | 123 | A | 124 | U | 125 | A | 126 | A | 127 | C | 128 | G | 129 | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUCGAAUC | 1 |
| CUAUAACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCGAAU | 1 |
| UAUAAC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-cWW-tSH-R-R
- Heat map statistics
- Min 0.96 | Avg 0.48 | Max 0.96
Coloring options: