Motif HL_07972.1 Version HL_07972.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V9F_004 | 4V9F | 0.0000 | 0 | Mini UNCG related | 0 | LSU rRNA | U | 125 | C | 126 | U | 127 | A | 128 | A | 129 | cWW |
| 2 | HL_5J7L_163 | 5J7L | 0.9839 | 3 | DA | LSU rRNA | G | 1171 | C | 1172 | U | 1176 | G | 1177 | C | 1178 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUAA | 1 |
| GCUUAUGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUA | 1 |
| CUUAUG | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Mini UNCG related (1)
- (1)
- Basepair signature
- cWW-R-R
- Heat map statistics
- Min 0.98 | Avg 0.49 | Max 0.98
Coloring options: