Motif HL_08810.1 Version HL_08810.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | 2-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V8P_184 | 4V8P | 0.0000 | 0 | F1 | LSU rRNA | C | 1050 | C | 1051 | A | 1052 | A | 1053 | G | 1054 | cWW | ncSW | |
| 2 | HL_3J7Y_038 | 3J7Y | 0.9723 | 1 | A | LSU rRNA | U | 3154 | C | 3155 | A | 3156 | A | 3158 | A | 3159 | cWW | ntSW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CCAAG | 1 |
| UCACAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA | 1 |
| CACA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-tSW-R
- Heat map statistics
- Min 0.97 | Avg 0.49 | Max 0.97
Coloring options: