Motif HL_09340.1 Version HL_09340.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6F4G_001 | 6F4G | 0.0000 | 2 | C | U2-SL4 | U | 8 | A | 9 | U | 10 | U | 11 | G | 12 | A | 14 | G | 15 | A | 17 | C | 18 | C | 19 | G | 20 | cWW |
| 2 | HL_3IWN_002 | 3IWN | 0.8477 | 1 | A | C-di-GMP riboswitch | C | 57 | A | 58 | U | 59 | U | 60 | G | 61 | C | 62 | A | 63 | U | 65 | C | 66 | C | 67 | G | 68 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAUUGCAGUACCG | 1 |
| CAUUGCACUCCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUUGCAGUACC | 1 |
| AUUGCACUCC | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.85 | Avg 0.42 | Max 0.85
Coloring options: