Motif HL_09582.1 Version HL_09582.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-7 | 2-8 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4WJ4_005 | 4WJ4 | 0.0000 | 1 | B | A | 31||||5_455 | C | 32||||5_455 | U | 33||||5_455 | G | 34||||5_455 | U | 35||||5_455 | U | 36||||5_455 | A | 38||||5_455 | U | 39||||5_455 | cWW | ncWW | |
| 2 | HL_4WJ4_002 | 4WJ4 | 0.0000 | 1 | B | A | 31 | C | 32 | U | 33 | G | 34 | U | 35 | U | 36 | A | 38 | U | 39 | cWW | ncWW | |
| 3 | HL_4WJ3_011 | 4WJ3 | 0.2216 | 1 | T | A | 31 | C | 32 | U | 33 | G | 34 | U | 35 | U | 36 | A | 38 | U | 39 | cWW | ncWW | |
| 4 | HL_3KFU_005 | 3KFU | 0.2741 | 1 | L | G | 31 | C | 32 | U | 33 | G | 34 | U | 35 | U | 36 | A | 38 | C | 39 | cWW | cWW | ncWw |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| ACUGUUAAU | 3 |
| GCUGUUAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUGUUAA | 4 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-cWW-R-R-R
- Heat map statistics
- Min 0.22 | Avg 0.16 | Max 0.27
Coloring options: