Motif HL_11376.1 Version HL_11376.1 of this group appears in releases 1.5 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 1-3 | |||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3OWZ_004 | 3OWZ | 0.2025 | 3 | B | Domain II of glycine riboswitch | G | 49 | G | 50 | C | 54 | cWW |
| 2 | HL_1S72_003 | 1S72 | 0.0000 | 2 | 0 | LSU rRNA | G | 118 | A | 119 | C | 122 | cWW |
| 3 | HL_2QBG_002 | 2QBG | 0.4039 | 2 | A | 5S rRNA | G | 86 | U | 87 | C | 90 | cWW |
| 4 | HL_4BPP_013 | 4BPP | 0.5127 | 3 | A | 18S RRNA | C | 483 | U | 484 | G | 488 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGAAAC | 1 |
| GAAUC | 1 |
| GUCUC | 1 |
| CUUACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAA | 1 |
| AAU | 1 |
| UCU | 1 |
| UUAC | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.16 | 1.17 | 1.18 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-04 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-15 | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_11376.1 | Only in the parent motif |
|---|---|---|---|
| HL_82253.2 Compare | HL_3OWZ_004, HL_1S72_003 | HL_4BPP_013, HL_2QBG_002 | HL_1WZ2_007 |
| HL_97512.1 Compare | HL_2QBG_002 | HL_3OWZ_004, HL_4BPP_013, HL_1S72_003 | HL_3U5F_013 |
Children motifs
This motif has no children motifs.
Coloring options: