Motif HL_18368.5 Version HL_18368.5 of this group appears in releases 3.18 to 3.25
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6CMN_001 | 6CMN | 0.2446 | 1 | D | Trans-Activation Response RNA Element | C | 30 | U | 31 | G | 32 | G | 34 | cWW | |
| 2 | HL_5AMQ_001 | 5AMQ | 0.0000 | 3 | C | RNA | U | 3 | A | 4 | G | 5 | A | 9 | cWW | |
| 3 | HL_1H4S_002 | 1H4S | 0.3103 | 3 | T | tRNA | U | 32 | U | 33 | C | 34 | A | 38 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGGG | 1 |
| UAGUGUA | 1 |
| UUCGGGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGG | 1 |
| AGUGU | 1 |
| UCGGG | 1 |
Release history
| Release | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 |
|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: