Motif HL_18368.5 Version HL_18368.5 of this group appears in releases 3.18 to 3.25

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4	1-4
1	HL_6CMN_001	6CMN	0.2446	1	D	Trans-Activation Response RNA Element	C	30	U	31	G	32	G	34	cWW
2	HL_5AMQ_001	5AMQ	0.0000	3	C	RNA	U	3	A	4	G	5	A	9	cWW
3	HL_1H4S_002	1H4S	0.3103	3	T	tRNA	U	32	U	33	C	34	A	38	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
CUGGG	1
UAGUGUA	1
UUCGGGA	1

Non-Watson-Crick part of the motif

Sequence	Counts
UGG	1
AGUGU	1
UCGGG	1

Release history

Release	3.18	3.19	3.20	3.21	3.22	3.23	3.24	3.25
Date	2019-05-03	2019-05-31	2019-06-28	2019-07-26	2019-08-23	2019-09-19	2019-10-16	2019-11-13
Status	Updated, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (3)
Basepair signature: cWW-R
Heat map statistics: Min 0.24 | Avg 0.19 | Max 0.32

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