Motif HL_18722.1 Version HL_18722.1 of this group appears in releases 3.32 to 3.53
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-4 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6U8D_003 | 6U8D | 0.8284 | 0 | A | JIIIabc RNA (68-MER) | C | 232 | G | 233 | U | 234 | G | 235 | cWW | |
| 2 | HL_4LFB_018 | 4LFB | 0.0000 | 1 | Mini UNCG | A | SSU rRNA | G | 838 | U | 839 | C | 840 | C | 848 | ncWW |
| 3 | HL_6CZR_089 | 6CZR | 0.5411 | 1 | Mini UNCG | 1a | SSU rRNA | G | 822 | U | 823 | C | 824 | C | 826 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUCUC | 2 |
| CGUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCU | 2 |
| GU | 1 |
Release history
| Release | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 |
| Status | New id, > 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Mini UNCG (2)
- (1)
- Basepair signature
- cWW-R
- Heat map statistics
- Min 0.54 | Avg 0.52 | Max 0.96
Coloring options: