Motif HL_19162.1 Version HL_19162.1 of this group appears in releases 3.2 to 3.11

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6		7		8		9		10		11	1-11	2-10
1	HL_3IVK_001	3IVK	0.1497	1	M	class I ligase product	G	1	G	2	A	3	C	5\|\|A	A	6	C	7	U	8	A	9	U	10	A	11	C	12	cWW	tSH
2	HL_3HHN_006	3HHN	0.0000	1	E	Class I ligase ribozyme, self-ligation product	G	1	G	2	A	3	C	5	A	6	C	7	U	8	A	9	U	10	A	11	C	12	cWW	tSH
3	HL_3DHS_005	3DHS	0.5586	1	A	RNase P RNA	C	313	G	314	G	315	G	317	C	318	A	319	U	320	G	321	C	322	A	323	G	324	cWW	ntSH
4	HL_2A64_006	2A64	0.8303	1	A	ribonuclease P RNA	C	313	G	314	G	315	G	317	C	318	A	319	U	320	G	321	C	322	A	323	G	324	cWW	ntSH

3D structures

Complete motif including flanking bases

Sequence	Counts
GGAACACUAUAC	2
CGGCGCAUGCAG	2

Non-Watson-Crick part of the motif

Sequence	Counts
GAACACUAUA	2
GGCGCAUGCA	2

Release history

Release	3.3	3.4	3.5	3.6	3.7	3.8	3.9	3.10	3.2	3.11
Date	2018-03-08	2018-04-06	2018-05-04	2018-06-01	2018-06-29	2018-07-27	2018-08-24	2018-09-21	2018-09-26	2018-10-19
Status	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	New id, no parents	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (4)
Basepair signature: cWW-tSH-R-R-R-R-R-R-R
Heat map statistics: Min 0.15 | Avg 0.43 | Max 0.86

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