#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 61-6
1 HL_4V5O_0484V5O0.00000BA SSU rRNAC483U484U485A486C487G488cWW
2 HL_4V88_1984V880.96760A6 SSU rRNAC491A492U493U494C495G496cWW

3D structures

Complete motif including flanking bases
SequenceCounts
CUUACG1
CAUUCG1
Non-Watson-Crick part of the motif
SequenceCounts
UUAC1
AUUC1

Release history

Release3.33.43.53.63.73.83.93.103.23.11
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-19
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-R-R-R
    Heat map statistics
    Min 0.97 | Avg 0.48 | Max 0.97
    Help

    Coloring options:

    HL_4V5O_048:HL_4V5O_048 = 0HL_4V5O_048:HL_4V88_198 = 0.9676HL_4V88_198:HL_4V5O_048 = 0.9676HL_4V88_198:HL_4V88_198 = 0HL_4V5O_048HL_4V88_198Discrepancy0.000.200.400.600.80
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