Motif HL_25572.1 Version HL_25572.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 3-11 | 4-7 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4R0D_006 | 4R0D | 0 | 0 | A | Group II catalytic intron | U | 217 | U | 218 | C | 219 | G | 220 | A | 221 | C | 222 | A | 223 | U | 224 | A | 225 | A | 226 | G | 227 | G | 228 | G | 229 | ncWW | cSW | ntSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUCGACAUAAGGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCGACAUAAGG | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-R-cSW-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: