Motif HL_25947.1 Version HL_25947.1 of this group appears in releases 1.16 to 1.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 1-21 | 3-20 | 4-18 | 5-16 | 7-14 | |||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1VWW_001 | 1VWW | 0 | 2 | 5 | 28S ribosomal RNA | C | 30 | U | 31 | G | 32 | A | 33 | A | 34 | U | 35 | U | 36 | U | 37 | A | 38 | G | 40 | C | 41 | U | 43 | A | 44 | U | 45 | U | 46 | A | 47 | G | 48 | U | 49 | C | 50 | A | 51 | G | 52 | cWW | ncSW | tHW | ntHH | ncWw |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUGAAUUUAAGCAUAUUAGUCAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAAUUUAAGCAUAUUAGUCA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-L-R-R-L-tHW-L-R-R-R-L-cWW-cWW-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: