#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 31-3
1 HL_4V88_1974V880.00004 A6 SSU rRNAU450A451A456cWW
2 HL_8JY0_0028JY00.33094 BRhoBASTU30G31A36cWW
3 HL_9BUN_0029BUN0.35594 ARNA (48-MER)U14G15A20cWW
4 HL_2ZNI_0012ZNI0.32934 Cbacterial tRNAC13G14G21cWW
5 HL_2QUX_0022QUX0.74225 FRNA (25-MER)G10A11C17cWW
6 HL_8UO6_0078UO60.89424 BHIV-1 Rev Response Element Stem-Loop II with tRNA scaffoldA77A78U83cWW
7 HL_5XWP_0015XWP0.58348 CRNA (59-MER)C9A10G19cWW
8 HL_8C3A_0708C3A0.92625 1 LSU rRNAC3205G3206G3212cWW
9 HL_5TBW_0695TBW0.94655 1 LSU rRNAC3240G3241G3247cWW

3D structures

Complete motif including flanking bases
SequenceCounts
UGAAGGA2
CGGAAAGG2
UAAUUCA1
CGAAUAG1
GAUAUGGC1
AAUUAUU1
CAAAAAUGAAG1
Non-Watson-Crick part of the motif
SequenceCounts
GAAGG2
GGAAAG2
AAUUC1
GAAUA1
AUAUGG1
AUUAU1
AAAAAUGAA1

Release history

Release3.853.863.87
Date2024-06-192024-07-172024-08-14
StatusNew id, > 2 parentsExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
Basepair signature
cWW-F
Heat map statistics
Min 0.07 | Avg 0.48 | Max 0.95
Help

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