Motif HL_27478.1 Version HL_27478.1 of this group appears in releases 1.15 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3U5F_002 | 3U5F | 0.0000 | 1 | 6 | 18S rRNA | C | 70 | A | 71 | A | 72 | U | 73 | U | 74 | U | 75 | A | 76 | A | 78 | C | 79 | A | 80 | G | 81 | cWW |
| 2 | HL_4CUX_002 | 4CUX | 0.6857 | 1 | 2 | 18S RRNA | C | 70 | A | 71 | A | 72 | U | 73 | U | 74 | U | 75 | A | 76 | A | 78 | C | 79 | A | 80 | G | 81 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAAUUUAUACAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAUUUAUACA | 2 |
Release history
| Release | 1.15 | 1.16 | 1.17 | 1.18 |
|---|---|---|---|---|
| Date | 2014-06-15 | 2014-07-26 | 2014-09-06 | 2014-10-09 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_27478.1 | Only in the parent motif |
|---|---|---|---|
| HL_00090.1 Compare | HL_3U5F_002 | HL_4CUX_002 |
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.69 | Avg 0.34 | Max 0.69
Coloring options: