Motif HL_27593.1 Version HL_27593.1 of this group appears in releases 3.2 to 3.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V8P_085 | 4V8P | 0.3581 | 1 | D1 | LSU rRNA | U | 67 | A | 68 | A | 69 | C | 70 | A | 72 | cWW | ncSH |
| 2 | HL_4UYK_003 | 4UYK | 0.0000 | 1 | R | SRP RNA | U | 98 | G | 99 | U | 100 | A | 101 | G | 103 | cWW | ntSW |
| 3 | HL_4V8P_107 | 4V8P | 0.9210 | 0 | D1 | LSU rRNA | C | 1050 | C | 1051 | A | 1052 | A | 1053 | G | 1054 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UAACUA | 1 |
| UGUAAG | 1 |
| CCAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AACU | 1 |
| GUAA | 1 |
| CAA | 1 |
Release history
| Release | 3.2 |
|---|---|
| Date | 2018-09-26 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-tSW-R
- Heat map statistics
- Min 0.36 | Avg 0.50 | Max 0.98
Coloring options: