#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 61-62-45-6
1 HL_4WF9_0244WF90.00001X LSU rRNAA824G825A827A828U829U830cWWtSWcSH
2 HL_4Y4O_1264Y4O0.345812A LSU rRNAU779G780A782A783A784G785cWWtSW

3D structures

Complete motif including flanking bases
SequenceCounts
AGAAAUU1
UGAAAAG1
Non-Watson-Crick part of the motif
SequenceCounts
GAAAU1
GAAAA1

Release history

Release3.483.493.503.513.523.53
Date2021-08-182021-09-152021-10-132021-11-102021-12-082022-01-05
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tSW-R
    Heat map statistics
    Min 0.35 | Avg 0.17 | Max 0.35
    Help

    Coloring options:

    HL_4WF9_024:HL_4WF9_024 = 0HL_4WF9_024:HL_4Y4O_126 = 0.3458HL_4Y4O_126:HL_4WF9_024 = 0.3458HL_4Y4O_126:HL_4Y4O_126 = 0HL_4WF9_024HL_4Y4O_126Discrepancy0.000.050.100.150.200.250.30
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