Motif HL_28567.1 Version HL_28567.1 of this group appears in releases 3.18 to 3.25
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3DIL_004 | 3DIL | 0.9676 | 0 | A | RNA (174-MER) | G | 149 | G | 150 | U | 151 | C | 152 | U | 153 | C | 154 | cWW | ncWS | |
| 2 | HL_4RUM_001 | 4RUM | 0.6068 | 1 | A | NiCo riboswitch RNA | C | 27 | A | 28 | G | 29 | G | 31 | C | 32 | G | 33 | cWW | ||
| 3 | HL_3ADD_003 | 3ADD | 0.0000 | 0 | C | Selenocysteine transfer RNA | C | 47|||D | G | 47|||E | A | 47|||F | G | 47|||G | U | 47|||H | G | 47|||I | cWW | ||
| 4 | HL_2OEU_002 | 2OEU | 0.5658 | 2 | A | Hammerhead Ribozyme | C | 25 | C | 26 | A | 27 | U | 30 | A | 31 | G | 32 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGUCUC | 1 |
| CAGAGCG | 1 |
| CGAGUG | 1 |
| CCAAAUAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUCU | 1 |
| AGAGC | 1 |
| GAGU | 1 |
| CAAAUA | 1 |
Release history
| Release | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 |
|---|---|---|---|---|---|---|---|---|
| Date | 2019-05-03 | 2019-05-31 | 2019-06-28 | 2019-07-26 | 2019-08-23 | 2019-09-19 | 2019-10-16 | 2019-11-13 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: