Motif HL_34210.1 Version HL_34210.1 of this group appears in releases 3.25 to 3.47
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6MJ0_006 | 6MJ0 | 0.0000 | 0 | B | tRNA-like 3' UTR element | U | 12 | C | 13 | U | 14 | U | 15 | U | 16 | A | 17 | A | 18 | A | 19 | A | 20 | cWW | cSW | ncSH | |
| 2 | HL_1P6V_002 | 1P6V | 0.8380 | 2 | B | 45-MER | G | 44 | G | 45 | U | 46 | U | 47 | C | 48 | G | 49 | A | 50 | C | 53 | C | 54 | cWW | cWW | ntWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UCUUUAAAA | 1 |
| GGUUCGAUUCC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUUUAAA | 1 |
| GUUCGAUUC | 1 |
Release history
| Release | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2019-11-13 | 2019-12-11 | 2020-01-08 | 2020-02-05 | 2020-03-04 | 2020-04-01 | 2020-04-29 | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
- Basepair signature
- cWW-cSW-cWW-R-R-R
- Heat map statistics
- Min 0.84 | Avg 0.42 | Max 0.84
Coloring options: