Motif HL_36284.1 Version HL_36284.1 of this group appears in releases 3.3 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | 1 | 2 | 3 | 4 | 5 | 1-5 | 2-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4TUE_033 | 4TUE | 0.0000 | 6 | tRNA D-loop | QV | C | 12 | A | 13 | G | 14 | A | 21 | G | 22 | cWW | cWS |
| 2 | HL_3WQY_001 | 3WQY | 0.4428 | 4 | C | C | 1613 | A | 1614 | G | 1615 | A | 1621 | G | 1622 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAGCCUGGUAG | 1 |
| CAGCGGGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGCCUGGUA | 1 |
| AGCGGGA | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-10-19 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- tRNA D-loop (1)
- Basepair signature
- cWW-cWS-R
- Heat map statistics
- Min 0.44 | Avg 0.22 | Max 0.44
Coloring options: