Motif HL_38646.1 Version HL_38646.1 of this group appears in releases 3.2 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 3-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4R0D_010 | 4R0D | 0.7828 | 0 | A | Group II catalytic intron | U | 447 | G | 448 | U | 449 | A | 450 | A | 451 | C | 452 | G | 453 | ncWW | ntSHa | |
| 2 | HL_3K0J_002 | 3K0J | 0.0000 | 1 | E | RNA (87-MER) | G | 66 | A | 67 | U | 68 | A | 69 | A | 70 | U | 71 | C | 73 | cWW | ||
| 3 | HL_3D2V_002 | 3D2V | 0.2059 | 1 | A | TPP riboswitch (THI element) | G | 54 | G | 55 | U | 56 | A | 57 | A | 58 | U | 59 | C | 61 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUAACG | 1 |
| GAUAAUGC | 1 |
| GGUAAUGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUAAC | 1 |
| AUAAUG | 1 |
| GUAAUG | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 |
|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: