Motif HL_38916.1 Version HL_38916.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5Y58_001 | 5Y58 | 0.0000 | 2 | X | TLC1 | U | 297 | G | 298 | G | 299 | U | 301 | A | 302 | A | 303 | A | 305 | cWW | tSH |
| 2 | HL_8OI5_030 | 8OI5 | 0.8189 | 1 | 1 | LSU rRNA | G | 1562 | A | 1563 | U | 1564 | U | 1565 | U | 1567 | U | 1568 | C | 1569 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGGCUAAAA | 1 |
| GAUUUUUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGCUAAA | 1 |
| AUUUUU | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F-F-F
- Heat map statistics
- Min 0.82 | Avg 0.41 | Max 0.82
Coloring options: