Motif HL_39035.1 Version HL_39035.1 of this group appears in releases 1.16 to 1.17
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | 19 | 20 | 21 | 1-21 | 2-20 | 3-19 | 4-18 | 5-12 | |||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1VWW_074 | 1VWW | 0 | 2 | 8 | 5.8S ribosomal RNA | G | 68 | U | 69 | G | 70 | A | 71 | A | 72 | U | 73 | U | 74 | G | 75 | C | 76 | A | 77 | G | 78 | G | 79 | A | 80 | C | 81 | A | 82 | A | 84 | U | 85 | G | 87 | A | 88 | U | 89 | C | 90 | cWW | ncwW | tSH | ntHS | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGAAUUGCAGGACACAUUGAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGAAUUGCAGGACACAUUGAU | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-tSH-tHS-R-R-R-R-R-cWW-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: