Motif HL_40664.1 Version HL_40664.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 1-5 | 4-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_5KK5_001 | 5KK5 | 0.7245 | 1 | B | RNA (40-MER) | C | -11 | U | -10 | C | -9 | U | -8 | G | -6 | cWW | ncWS |
| 2 | HL_5B43_001 | 5B43 | 0.6445 | 1 | B | RNA (43-MER) | C | -11 | U | -10 | C | -9 | U | -8 | G | -6 | cWW | |
| 3 | HL_3HHN_007 | 3HHN | 0.0000 | 0 | E | Class I ligase ribozyme, self-ligation product | C | 40 | G | 41 | A | 42 | A | 43 | G | 44 | cWW | |
| 4 | HL_3IVK_002 | 3IVK | 0.2385 | 0 | M | class I ligase product | C | 40 | G | 41 | A | 42 | A | 43 | G | 44 | cWW | |
| 5 | HL_4ZNP_001 | 4ZNP | 0.7149 | 1 | A | ZMP/ZTP riboswitch | G | 26 | G | 27 | A | 28 | A | 29 | C | 31 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUCUUG | 2 |
| CGAAG | 2 |
| GGAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCUU | 2 |
| GAA | 2 |
| GAAA | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.
Coloring options: