Motif HL_41200.1 Version HL_41200.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 2-16 | 3-12 | 4-13 | 5-10 | 6-9 | 7-8 | 12-14 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4V19_039 | 4V19 | 0 | 2 | A | LSU rRNA | A | 1512 | A | 1513 | U | 1514 | G | 1515 | A | 1516 | U | 1517 | U | 1518 | A | 1520 | A | 1521 | U | 1522 | C | 1523 | U | 1524 | A | 1526 | A | 1527 | C | 1528 | C | 1529 | U | 1530 | cWW | ncWWa | tWH | tSH | ntHW | ntHH | ncSH | cWH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AAUGAUUUAAUCUUAACCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUGAUUUAAUCUUAACC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-R-bif-cWH-tSH-tWH-R-tHW-tHH-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: