Motif HL_42687.1 Version HL_42687.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_3O58_027 | 3O58 | 0.0000 | 7 | 1 | C | 1239 | A | 1240 | C | 1248 | G | 1249 | cWW | |
| 2 | HL_361D_001 | 361D | 0.9531 | 2 | A | G | 86 | G | 87 | A | 89|||A | C | 90 | cWW | ntSH |
| 3 | HL_1GID_006 | 1GID | 0.9537 | 3 | B | G | 234 | A | 235 | U | 239 | C | 240 | cWW | ncWW |
| 4 | HL_1GID_003 | 1GID | 1.1675 | 3 | A | G | 234 | A | 235 | U | 239 | C | 240 | cWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUCUUC | 2 |
| CAUGGAAGUCG | 1 |
| GGCGAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AUCUU | 2 |
| AUGGAAGUC | 1 |
| GCGA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_42687.1 | Only in the child motif |
|---|---|---|---|
| HL_42687.2 Compare | HL_1GID_006, HL_361D_001, HL_1GID_003 | HL_3O58_027 |
Coloring options: