Motif HL_49169.1 Version HL_49169.1 of this group appears in releases 0.1 to 0.2
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_1JBR_002 | 1JBR | 0.0000 | 1 | D | 31-mer SRD RNA analog | C | 13 | G | 14 | A | 15 | A | 17 | G | 18 | cWW |
| 2 | HL_3A2K_002 | 3A2K | 0.9448 | 4 | C | bacterial tRNA | G | 32 | C | 33 | U | 34 | A | 36 | C | 40 | cWW |
| 3 | HL_3A2K_005 | 3A2K | 0.9494 | 4 | D | bacterial tRNA | G | 32 | C | 33 | U | 34 | A | 36 | C | 40 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCUCAUAAC | 2 |
| CGAGAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CUCAUAA | 2 |
| GAGA | 1 |
Release history
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in HL_49169.1 | Only in the child motif |
|---|---|---|---|
| HL_39422.1 Compare | HL_3A2K_002 | HL_3A2K_005, HL_1JBR_002 |
Coloring options: