Motif HL_49722.1 Version HL_49722.1 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 1-3 | 1-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_8C3A_054 | 8C3A | 0.0000 | 0 | 1 | LSU rRNA | C | 2543 | U | 2544 | C | 2545 | U | 2546 | G | 2547 | cWW | |
| 2 | HL_6CZR_102 | 6CZR | 0.5336 | 1 | 1a | SSU rRNA | C | 1430 | U | 1431 | A | 1432 | G | 1434 | G | 1435 | ntSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUCUG | 1 |
| CUACGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UCU | 1 |
| UACG | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-F-F
- Heat map statistics
- Min 0.53 | Avg 0.27 | Max 0.53
Coloring options: