Motif HL_50321.1 Version HL_50321.1 of this group appears in releases 3.8 to 3.11
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 1-3 | 1-4 | 2-3 | ||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_4M4O_001 | 4M4O | 0.0985 | 1 | B | RNA (59-MER) | C | 32 | U | 33 | A | 35 | G | 36 | cWW | cWS | ||
| 2 | HL_4M6D_004 | 4M6D | 0.0000 | 1 | H | aptamer | C | 32 | U | 33 | A | 35 | G | 36 | cWW | cWS | ||
| 3 | HL_3P49_005 | 3P49 | 0.4753 | 0 | A | Glycine riboswitch | A | 19 | U | 20 | A | 25 | U | 26 | ncWw | ncWW | ncWW | |
| 4 | HL_5TBW_012 | 5TBW | 0.7987 | 2 | 1 | LSU rRNA | C | 543 | C | 544 | G | 547 | G | 548 | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUAG | 2 |
| AUAU | 1 |
| CCUCGG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUA | 2 |
| UA | 1 |
| CUCG | 1 |
Coloring options: